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HYPHY Package >> HyPhy bugs >> running HYPHY on ppc64 GNU/Linux http://www.hyphy.org/cgi-bin/hyphy_forums/YaBB.pl?num=1119356089 Message started by avilella on Jun 21st, 2005 at 5:14am |
Title: running HYPHY on ppc64 GNU/Linux Post by avilella on Jun 21st, 2005 at 5:14am
Hi all,
I compiled HYPHY on a OpenPower 720 ppc64 GNU/Linux, but I'm having a problem when running it: ./HYPHYMP options 1->1 Error: Operation: < is not defined. with options 2->1: Error: Operation: MAccess is not defined. It seems there is a problem when asking for files. Any guess? Albert. |
Title: Re: running HYPHY on ppc64 GNU/Linux Post by Sergei on Jun 21st, 2005 at 8:07am
Dear Albert,
wrote on Jun 21st, 2005 at 5:14am:
I have run into a similar problem with IBM's xLC. It is due to the fact that I made a (non-portable) assumption that 'char' types in C are signed by default, while on some systems they are unsigned by default (e.g. PPC systems). Your compiler should have a command line option to force the 'char' type to be signed. In gcc, the option is -fsigned-char. If you turn that on and recompile, things should improve. Cheers, Sergei |
Title: Re: running HYPHY on ppc64 GNU/Linux Post by avilella on Jun 21st, 2005 at 8:50am
yep, that did the trick:
COMPILER_FLAGS=" -w -c -O3 -D__HYPHY_NO_CURL__ -fsigned-char -fpermissive -I`pwd`/Source -I`pw\d`/Source/SQLite "; Thanks again, Albert. |
Title: Re: running HYPHY on ppc64 GNU/Linux Post by Sergei on Jun 21st, 2005 at 1:51pm
Dear Albert,
I will add the flag to the standard build script. Thanks for bringing this to my attention. Cheers, Sergei |
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