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http://www.hyphy.org/cgi-bin/hyphy_forums/YaBB.pl HYPHY Package >> Feature Additions >> Final ";" in Save trees to file http://www.hyphy.org/cgi-bin/hyphy_forums/YaBB.pl?num=1129551320 Message started by avilella on Oct 17^th, 2005 at 5:15am

Title: Final ";" in Save trees to file
Post by avilella on Oct 17^th, 2005 at 5:15am

Dears,

I would like to suggest a minimal modification in the "Save trees to file" part of post_sns.bf:

Just to add a ";" at the end of each tree, as some programs will choke
when parsing these trees without the final ";"

avb@magneto:~/9_opl/hyphy_latest/HYPHY_Source/TemplateBatchFiles$ diff -u post_sns.bf.ori post_sns.bf
--- post_sns.bf.ori 2005-10-17 14:10:04.203712528 +0200
+++ post_sns.bf 2005-10-17 14:09:36.160975672 +0200
@@ -115,5 +115,5 @@
else
{
SetDialogPrompt ("Save trees to file:");
- fprintf (PROMPT_FOR_FILE, CLEAR_FILE, synTreeString, "\n", nonSynTreeString, "\n");
+ fprintf (PROMPT_FOR_FILE, CLEAR_FILE, synTreeString, "\;\n", nonSynTreeString, "\;\n");
}

Bests,

Albert.

Title: Re: Final ";" in Save trees to file
Post by Sergei on Oct 17^th, 2005 at 3:50pm

Dear Albert,

As always; thanks for your thoughtful suggestions. I have included the change in the file and it be rolled into the next update.

Cheers,
Sergei

Title: Re: Final ";" in Save trees to file
Post by avilella on Nov 7^th, 2005 at 6:01am

Silly of me, The ";" at the end of the treestrings cannot be escaped,
so that it appears in the output file:

--- /home/avb/9_opl/hyphy_latest/HYPHY_Source/TemplateBatchFiles/post_sns.bf.ori 2005-11-07 14:36:58.000000000 +0100
+++ /home/avb/9_opl/hyphy_latest/HYPHY_Source/TemplateBatchFiles/post_sns.bf 2005-11-07 14:56:59.000000000 +0100
@@ -117,5 +117,5 @@
else
{
SetDialogPrompt ("Save trees to file:");
- fprintf (PROMPT_FOR_FILE, CLEAR_FILE, synTreeString, "\;\n", nonSynTreeString, "\;\n");
+ fprintf (PROMPT_FOR_FILE, CLEAR_FILE, synTreeString, ";\n", nonSynTreeString, ";\n");
}