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http://www.hyphy.org/cgi-bin/hyphy_forums/YaBB.pl HYPHY Package >> HyPhy feedback >> A bug in LFCompute FUNC (win32) http://www.hyphy.org/cgi-bin/hyphy_forums/YaBB.pl?num=1145627536 Message started by U. Levitov on Apr 21^st, 2006 at 6:52am

Title: A bug in LFCompute FUNC (win32)
Post by U. Levitov on Apr 21^st, 2006 at 6:52am

Hi,

Please be informed of a bug in HYPHY-P3.EXE - win32 .

Here is the log:
Error:lf is not a defined likelihood function ID in call to LFCompute.
Current BL Command:LFCompute(lf,LF_START_COMPUTE)

Best regards,
Levitov

Title: Re: A bug in LFCompute FUNC (win32)
Post by Sergei on Apr 21^st, 2006 at 7:33am

Greetings,

Based on the error report, my first guess is that 'lf' was not defined prior to calling LFCompute. Typical usage would look like this:

[code]
Read some data
Define some trees and models

LikelihoodFunction lf = (myData, myTree);
LFCompute (lf,LF_START_COMPUTE);
LFCompute (lf,res);
LFCompute (lf,LF_DONE_COMPUTE);

[/code]

Would you mind pasting in the complete code example which leads to the error?

Cheers,
Sergei