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http://www.hyphy.org/cgi-bin/hyphy_forums/YaBB.pl HYPHY Package >> Announcements >> [ANNOUNCEMENT]How to do selection analyses w/HyPhy http://www.hyphy.org/cgi-bin/hyphy_forums/YaBB.pl?num=1165612250 Message started by Sergei on Nov 9^th, 2006 at 9:22am

Title: [ANNOUNCEMENT]How to do selection analyses w/HyPhy
Post by Sergei on Nov 9^th, 2006 at 9:22am

Dear HyPhy users,

We have just finished writing a book chapter on selection analyses in HyPhy (both theory and practice), for the 2nd edition of the Phylogenetic Handbook. If you are interested in taking a look at the chapter before it is published, please send me an e-mail, and I'll e-mail you a copy - in exchange I would really appreciate any comments or feedback you might have.

Cheers,
Sergei

Title: Re: [DOCUMENT] How to do selection analyses in HyP
Post by Fargette on Nov 18^th, 2006 at 12:39am

Dear Serguei,

I would be interested to receive the draft version of the chapter you are writing on selection analyses in Hyphy. Indeed, if I have any comment, I will let you know. I take the opportunity to thank you and your group for developing such a powerful and friendly (in all senses of the word) software. Best Regards. Denis.

Title: Re: [ANNOUNCEMENT]How to do selection analyses w/H
Post by iderval on Dec 13^th, 2006 at 5:41pm

Dear Sergei,
I´m interested in receiving the draft version of the chapter on selection analyses in Hyphy. Surely, if I have any coments I' m glad to send to you.
Best regards,

Iderval

Title: Re: [ANNOUNCEMENT]How to do selection analyses w/H
Post by davoodi on Jan 3^rd, 2007 at 9:56pm

Dear Sergi,
would you be willing to send me a draft copy you wrote on selection analysis in Hyphy.
Thank you very much

Title: Re: [ANNOUNCEMENT]How to do selection analyses w/H
Post by gnolasco on Feb 6^th, 2007 at 5:07am

Hi sergei,
I would like very much to receive the draft of the book.
thanks, Gustavo Nolasco
gnolasco@ualg.pt

Title: Re: [ANNOUNCEMENT]How to do selection analyses w/H
Post by Flavia Piñeiro y Leone on Feb 15^th, 2007 at 10:39am

Dear Sergei,

I would be really grateful if you could send me a copy of the chapter you have written on selection analysis using HY-PHY. I surely would try to cooperate with comments. Thank you very much in advance.
With best regards,

Flavia Piñeiro y Leone
flavia@qb.ffyb.uba.ar

Title: Re: [ANNOUNCEMENT]How to do selection analyses w/H
Post by jinyong on Feb 25^th, 2007 at 9:14am

Dear Sergei, thanks in advance if you could kindly send me a copy of the selection analysis based on the HyPhy package! It will be greatly appreciated if you could also send me a copy of the tutorial on how to use the HyPhy package.

Thanks again!

jinyong(at)mpiz-koeln.mpg.de

Title: Re: [ANNOUNCEMENT]How to do selection analyses w/H
Post by laurac on Mar 2^nd, 2007 at 2:48am

Dear Sergei. I would be very happy to receive a draft of the chapter on positive selection using HyPhy, that you wrote.
I hope it's not too late to send comments.
Thanks and best regards
Laura

Title: Re: [ANNOUNCEMENT]How to do selection analyses w/H
Post by NPalopoli on Mar 15^th, 2007 at 7:22am

Dear Sergei,
I would be really grateful if you could send me the chapter you have written. I will review it and then I will provide you with sincere feedback.
Thank you very much in advance.
Nicolás Palopoli.
Unidad de Fisicoquímica -
Universidad Nacional de Quilmes, Argentina

Title: Re: [ANNOUNCEMENT]How to do selection analyses w/H
Post by wuguanghua on Jun 14^th, 2007 at 5:53pm

Thanks for your powful and free tool the Hyphy which would much facilitate my study. And I would appreciate it a lot if you can send me materials of how to do selection analysis with Hyphy!my email is wugh@genomics.org.cn

Title: Re: [ANNOUNCEMENT]How to do selection analyses w/H
Post by YZ on Sep 28^th, 2007 at 1:19pm

Dear Sergei:

I am very interested in receiving the draft version of how to do selection analyses with Hyphy. I am currently working on selection analyses using Hyphy and have some questions. I believe it will help a lot.

Thank you very much.

Joice

Title: Re: [ANNOUNCEMENT]How to do selection analyses w/H
Post by Sergei on Sep 28^th, 2007 at 1:48pm

Dear Joice,

The book chapter can be downloaded from Multimedia File Viewing and Clickable Links are available for Registered Members only!! You need to

Title: Re: [ANNOUNCEMENT]How to do selection analyses w/H
Post by wuguanghua on Sep 28^th, 2007 at 6:14pm

Hi,
Thank you so much for keeping providing many useful tools and ideas about genomic adaptive selection analysis. They are really helpful for our study. I would like to have your draft of How to do selection analysis with Hyphy. Could you please email it to me? My email is wugh@genomics.org.cn
Thanks!