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HYPHY Package >> HyPhy bugs >> compile problem using latest source
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Message started by jlary on Feb 22nd, 2007 at 8:25am

Title: compile problem using latest source
Post by jlary on Feb 22nd, 2007 at 8:25am
I'm compiling the latest version on a Mac 0SX 10.4 G5 machine and at the beginning I receive an error/warning that sizeoflong.c doesn't exist -

powerpc-apple-darwin8-gcc-4.0.1: sizeoflong.c: No such file or directory
powerpc-apple-darwin8-gcc-4.0.1: no input files
build.sh: line 1: ./sizeoflong: No such file or directory

The build proceeds through to the end and running HYPHY via the command line appears to work.  Is this just an inconsequential problem/warning?

Thanks,
Jeff Lary.

Title: Re: compile problem using latest source
Post by Sergei on Feb 22nd, 2007 at 9:34am
Dear Jeff,

I'll check the warning message. It has to do with trying to determine the size of a long interger (C 'long') type run time to compile the SQLite database component properly.

Thanks for bringing this to my attention.

Best,
Sergei

Title: Re: compile problem using latest source
Post by jlary on Feb 22nd, 2007 at 10:01am
Sergei,
Thanks for the quick response.  The file that it's looking for to determine the size-of-long isn't contained in the source code so that part of the build.sh fails.  As a consequence, the contents of the SQLite/config.h file ends up looking like

#define SQLITE_PTR_SIZE

instead of something like

#define SQLITE_PTR_SIZE 4

It just looks like the "sizeoflong.c" file was left out of the archive and I'm not sure it even matters as I can't find any reference to SQLITE_PTR_SIZE in the code.

Jeff.

Title: Re: compile problem using latest source
Post by Sergei on Feb 22nd, 2007 at 10:27am
Dear Jeff,

Thanks for the update! The code will probably break if you try to use any SQLite features (like DoSQL commands in the batch language), but I will fix the problem for the next release.

Cheers,
Sergei

Title: Re: compile problem using latest source
Post by Sergei on Feb 22nd, 2007 at 4:35pm
Dear Jeff,

I modified the build scripts to use gcc's -D flag in place of a checking program.

Thanks for the report once again.

Cheers,
Sergei

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