Hello,
I have tried to process GARD results twice using HYPHYMPI 65 and I have gotten errors each time:

KH Testing partition 1
Tree 2 base LRT = 148.916. p-value = Error:

Master node received an error:Operation 'MAccess' is not implemented/defined for a Number

Function call stack
1 : resMx1[k]=+(resampled[0][-1])
-------
2 : textMx=testLRT(partTreeConds,otherPartTree,khIterations)%0
-------
[0] MPI Abort by user Aborting program !
[0] Aborting program!
p0_96150:  p4_error: : 1
p1_96163:  p4_error: interrupt SIGx: 13
p6_96173:  p4_error: net_recv read:  probable EOF on socket: 1
p5_96171:  p4_error: net_recv read:  probable EOF on socket: 1
p8_96177:  p4_error: net_recv read:  probable EOF on socket: 1
p7_96175:  p4_error: net_recv read:  probable EOF on socket: 1
p48_96257:  p4_error: net_recv read:  probable EOF on socket: 1
p47_96255:  p4_error: net_recv read:  probable EOF on socket: 1

I have used the .nex file and the out_splits file as input. The .nex file is the same that I used to generate the initial GARD results. Thanks!

-Crystal Hepp

Hi Crystal,

Try now. I inadvertently introduced a bug into GARDProcessor.bf recently. Also, you can run it through HYPHYMP (not HYPHYMPI), because this file does not make use of MPI.

Sergei

Thank for looking at this. There is now a different error:

KH Testing partition 1
Tree 2 base LRT = 152.981. p-value = Error:
Incompatible Operands Exiting...

Function call stack
1 : resMx=(resMx1-resMx2)*2
-------
2 : textMx=testLRT(partTreeConds,otherPartTree,khIterations)%0
-------

---

Hi Crystal,

Another bug -- fixed; try again please.

Sergei

SUCCESS! :D