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HYPHY Package >> HyPhy feedback >> can't install hyphy command line on Red Hat 4.5.1 http://www.hyphy.org/cgi-bin/hyphy_forums/YaBB.pl?num=1322414552 Message started by indapa on Nov 27th, 2011 at 9:22am |
Title: can't install hyphy command line on Red Hat 4.5.1 Post by indapa on Nov 27th, 2011 at 9:22am
Hi,
I am a newbie to HyPhy and attempting to install it on RedHat I have cmake installed and run the command: > cmake ./ just fine Next, I try: > make MP2 and get the error: [100%] Building CXX object CMakeFiles/HYPHYMP.dir/src/mains/unix.cpp.o Linking CXX executable HYPHYMP /usr/bin/ld: CMakeFiles/HYPHYMP.dir/contrib/SQLite-3.6.17/sqlite3.c.o: undefined reference to symbol 'dlclose@@GLIBC_2.2.5' /usr/bin/ld: note: 'dlclose@@GLIBC_2.2.5' is defined in DSO /lib64/libdl.so.2 so try adding it to the linker command line /lib64/libdl.so.2: could not read symbols: Invalid operation collect2: ld returned 1 exit status make[3]: *** [HYPHYMP] Error 1 make[2]: *** [CMakeFiles/HYPHYMP.dir/all] Error 2 make[1]: *** [CMakeFiles/MP2.dir/rule] Error 2 make: *** [MP2] Error 2 I am not sure how to interpret the error message. Can you help me out? |
Title: Re: can't install hyphy command line on Red Hat 4.5.1 Post by Sergei on Nov 27th, 2011 at 10:57am
Hi indapa,
Looks like our cmake script needs to be modified to look for libdl. In the meantime, please edit line 210 in CMakeLists.txt to read Code (] target_link_libraries(HYPHYMP crypto curl pthread ssl ldl) [/code):
Sergei |
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