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Methodology Questions >> How to >> higher throughput compartmentalization analysis http://www.hyphy.org/cgi-bin/hyphy_forums/YaBB.pl?num=1330354812 Message started by eab on Feb 27th, 2012 at 7:00am |
Title: higher throughput compartmentalization analysis Post by eab on Feb 27th, 2012 at 7:00am
I have a set of 13 study subjects from whom I sequenced groups of clones from each of 12 cellular populations. I would like to test which populations are compartmentalized from which. Can anyone suggest a way of doing this efficiently?
As it is now, I need to make a separate tree for each pair of populations (12 + 11 + 10 ... + 1 = 78 trees) from each donor (x 13 = 1014 trees) and then test each one separately in HyPhy. I hope there is an easier way to perform this screening! Eli |
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