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http://www.hyphy.org/cgi-bin/hyphy_forums/YaBB.pl HYPHY Package >> HyPhy bugs >> Branchsite REL crash http://www.hyphy.org/cgi-bin/hyphy_forums/YaBB.pl?num=1349794947 Message started by anlagers2 on Oct 9^th, 2012 at 8:02am

Title: Branchsite REL crash
Post by anlagers2 on Oct 9^th, 2012 at 8:02am

Hello,

I've downloaded HyPhy on my Mac (v10.7.4). When I run Branch-site REL analysis, during Phase 2 HyPhy crashes. Because I can successfully run the same nexus file on the datamonkey server, I don't think the problem is with my file. Any suggestions would be appreciated.

Thanks.

Title: Re: Branchsite REL crash
Post by Sergei on Oct 9^th, 2012 at 10:57am

Hi there,

OS Lion (10.7) had some issues (out of my control) which caused some multi-threaded programs (including HyPhy) to crash.
You should disable multiprocessing (Preferences->Multiple Processors->CPUs to Load-> set to 1); this will most likely fix the problem.

Sergei

Title: Re: Branchsite REL crash
Post by anlagers2 on Oct 10^th, 2012 at 9:34am

Like a charm.
Thanks.