HyPhy message board | |
http://www.hyphy.org/cgi-bin/hyphy_forums/YaBB.pl
Methodology Questions >> How to >> Choosing GTR for compartmentalization analysis http://www.hyphy.org/cgi-bin/hyphy_forums/YaBB.pl?num=1391348754 Message started by eunok on Feb 2nd, 2014 at 5:45am |
Title: Choosing GTR for compartmentalization analysis Post by eunok on Feb 2nd, 2014 at 5:45am
Hi Sergie
I have small questions about choosing GTR as the substitution model when analysing compartmentalization using Fst. I thought you need to choose Custom and enter 6 digit code, 012345, to choose GTR for Fst compartmentalization. Is this right? What is the difference between GRM and GTR? (could you please recommend me some papers about GRM? :-[) -Eunok |
Title: Re: Choosing GTR for compartmentalization analysis Post by Sergei on Feb 13th, 2014 at 4:06pm
Hi Eunok,
GTR and GRM are the same thing: General Time Reversible vs General Reversible Model. Sorry for the confusion. Sergei |
HyPhy message board » Powered by YaBB 2.5.2! YaBB Forum Software © 2000-2023. All Rights Reserved. |