How to Discussion board on how to answer/test biological questions using HyPhy. Post your 'Can I do this?' or 'How do I do this?' questions here (Moderators: Sergei, Simon)

Topics: 324 Posts: 1378

Pages: 1 ... 14 15 16 17

		Subject	Started By	Replies	Views	Last Post
		scale the tree on syn or nonsyn via script	Antonio (Guest)	1	1503	Nov 10th, 2005 at 3:09am By: Sergei
		Mac OS X hyphy in "batch" mode?	jamescotton	4	5779	Nov 2nd, 2005 at 10:31am By: Sergei
		inferring topologies	konrad	2	1982	Oct 24th, 2005 at 7:26am By: konrad
		How can I profile a HYPHY execution?	avilella	3	2490	Oct 21st, 2005 at 3:39pm By: Sergei
		HYPHY reading NEXUS charpartitions	jamescotton	1	1447	Oct 21st, 2005 at 8:43am By: Sergei
		Using nonreversible nucleotide models	Jeff Mower (Guest)	7	3648	Oct 13th, 2005 at 9:33am By: Sergei
		constraining branch lengths to observed values	jamescotton	12	5616	Sep 28th, 2005 at 11:13am By: Sergei
		Wong-Nielsen selection test	ofedrigo	0	1467	Sep 27th, 2005 at 7:02am By: ofedrigo
		Command Reference to download..	jamescotton	3	1869	Sep 16th, 2005 at 11:56am By: Sergei
		Relative Ratio Test and 2 nt. subs. models	David_Soria	1	1408	Sep 11th, 2005 at 11:53am By: Sergei
		Relative Ratio tests	jh	1	2977	Sep 1st, 2005 at 11:46am By: Sergei
		comparing branch lengths among subclades in a tree	cwheat	1	1235	Aug 23rd, 2005 at 11:24am By: Sergei
		S,N and S*dS,N*dN in each branch	avilella	1	1356	Aug 4th, 2005 at 12:35pm By: Sergei
		"Free-ratios"-like analysis in PAML	avilella	4	4051	Jul 26th, 2005 at 11:19am By: Sergei
		Codon relative rate test questions	Sergei	0	1202	Jun 27th, 2005 at 11:39am By: Sergei
		Defining custom alphabets for sequence data.	Sergei	1	1391	May 24th, 2005 at 3:10am By: Steven (Guest)
		How to simulate data with user branch lengths	Sergei	0	891	May 18th, 2005 at 10:42am By: Sergei
		non-synonymous and synonymous rates	adk (Guest)	10	5115	May 11th, 2005 at 2:36pm By: Sergei
		ML with defined constraints ?	Bryony Mackenzie (Guest)	1	1300	May 11th, 2005 at 7:25am By: Sergei
		How to measure the adequacy of a model	Federico Abascal (Guest)	5	2701	May 4th, 2005 at 2:12am By: federico Abascal (Guest)

Pages: 1 ... 14 15 16 17

Normal Topic Sticky Topic Locked Topic Sticky Locked Topic Moved Topic

Global Announcement Locked Global Announcement Hot Topic (More than 10 Replies) Very Hot Topic (More than 25 Replies)

You can view Topics in this Board. You cannot post replies to Topics in this Board. You cannot start new Topics in this Board. You cannot post Attachments in this Board. You cannot start Polls in this Board.

Forum Jump » Home » 10 most recent Posts » 10 most recent Topics HYPHY Package   - HyPhy feedback   - HyPhy bugs   - Feature Additions   - Contributions   - Announcements Datamonkey Server   - Datamonkey feedback   - Datamonkey bugs Methodology Questions »» How to Theoretical questions   - Sequence Analysis