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scale the tree on syn or nonsyn via script (Read 1859 times)

Antonio

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scale the tree on syn or nonsyn via script
Nov 9^th, 2005 at 10:57am

Hi,
I am reproducing an analysis fo codon models as in Kosakovsky et al (2005, Statistical Methods in Molecular Evolution). I just using a MG94 local model. My question is: Once I get the likelihood and the tree I wonder how to scale the tree to synonymous or non-synonymous views via scripting? because I want to get saved separately both tree-views, is that possible? I thought in pstreestring but I dont' know what parameter give to this function.

By the way I am enjoying with this wonderful soft.

,
antonio

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Sergei YaBB Administrator Offline Datamonkeys are forever... Posts: 1658 UCSD Gender:	Re: scale the tree on syn or nonsyn via scri Reply #1 - Nov 10^th, 2005 at 3:09am Dear Antonio, Several other people asked me similar questions, and I am preparing some code to address the issue; should be avialable in a day or two. Cheers, Sergei
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