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clusterbydistancerange (Read 1482 times)
YER
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clusterbydistancerange
Aug 25th, 2006 at 12:49am
 
Dear Sergei,

thanks once again for the recent additions!

One of them, is (for me) a bit unlogical. Upon running clusterbydistance.bf a number of clusters result that are indicated by a cluster ID; yet some of the cluster IDs occur only once in the output.

Could you indicate how can one identify the other sequences belonging to a cluster?

Thanks, YER
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Sergei
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Re: clusterbydistancerange
Reply #1 - Aug 25th, 2006 at 8:52am
 
Dear Yer,

A cluster of size 1 is possible in this analyses (imagine for example, a clock-like star tree - you will either get 1 cluster with N sequences, or N clusters with 1 sequence each) - this is what a single occurrence of a cluster ID indicates.

HTH,
Sergei
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