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Positive Selection in Presence of Recombination (Read 1292 times)
Sergei
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UCSD
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Positive Selection in Presence of Recombination
Aug 31st, 2006 at 10:26am
 
Greetings,

I have added an analysis (due to Konrad Scheffler, Darren P. Martin, and Cathal Seoighe, University of Cape Town) which is capable for detecting whether or not there is evidence of positive selection (dN>dS) in an alignment which contains recombinant sequences. The paper describing the method can be found at Multimedia File Viewing and Clickable Links are available for Registered Members only!!  You need to Login Login and the files implementing the analysis are in the 'Contributions' directory of the HyPhy distribution (builds of Aug 31st, 2006 or later).

Cheers,
Sergei
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Associate Professor
Division of Infectious Diseases
Division of Biomedical Informatics
School of Medicine
University of California San Diego
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