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[ANNOUNCEMENT]How to do selection analyses w/HyPhy (Read 5844 times)
Sergei
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[ANNOUNCEMENT]How to do selection analyses w/HyPhy
Nov 9th, 2006 at 9:22am
 
Dear HyPhy users,

We have just finished writing a book chapter on selection analyses in HyPhy (both theory and practice), for the 2nd edition of the Phylogenetic Handbook. If you are interested in taking a look at the chapter before it is published, please send me an e-mail, and I'll e-mail you a copy - in exchange I would really appreciate any comments or feedback you might have.

Cheers,
Sergei
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« Last Edit: Dec 8th, 2006 at 1:20pm by Sergei »  

Associate Professor
Division of Infectious Diseases
Division of Biomedical Informatics
School of Medicine
University of California San Diego
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Fargette
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Re: [DOCUMENT] How to do selection analyses in HyP
Reply #1 - Nov 18th, 2006 at 12:39am
 
Dear Serguei,

I would be interested to receive the draft version of the chapter you are writing on selection analyses in Hyphy. Indeed, if I have any comment, I will let you know. I take the opportunity to thank you and your group for developing such a powerful and friendly (in all senses of the word) software. Best Regards. Denis.
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iderval
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Re: [ANNOUNCEMENT]How to do selection analyses w/H
Reply #2 - Dec 13th, 2006 at 5:41pm
 
Dear Sergei,
I´m interested in receiving the draft version of the chapter on selection analyses in Hyphy. Surely, if I have any coments I' m glad to send to you.
Best regards,

Iderval
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davoodi
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Re: [ANNOUNCEMENT]How to do selection analyses w/H
Reply #3 - Jan 3rd, 2007 at 9:56pm
 
Dear Sergi,
would you be willing to send me a draft copy you wrote on selection analysis in Hyphy.
Thank you very much
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gnolasco
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Re: [ANNOUNCEMENT]How to do selection analyses w/H
Reply #4 - Feb 6th, 2007 at 5:07am
 
Hi sergei,
I would like very much to receive the draft of the book.
thanks, Gustavo Nolasco
gnolasco@ualg.pt
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Flavia Piñeiro y Leone
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Re: [ANNOUNCEMENT]How to do selection analyses w/H
Reply #5 - Feb 15th, 2007 at 10:39am
 
Dear Sergei,

                    I would be really grateful if you could send me a copy of the chapter you have written on selection analysis using HY-PHY. I surely would try to cooperate with comments. Thank you very much in advance.
With best regards,

Flavia Piñeiro y Leone
flavia@qb.ffyb.uba.ar
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jinyong
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Re: [ANNOUNCEMENT]How to do selection analyses w/H
Reply #6 - Feb 25th, 2007 at 9:14am
 
Dear Sergei, thanks in advance if you could kindly send me a copy of the selection analysis based on the HyPhy package! It will be greatly appreciated if you could also send me a copy of the tutorial on how to use the HyPhy package.

Thanks again!

jinyong(at)mpiz-koeln.mpg.de
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laurac
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Re: [ANNOUNCEMENT]How to do selection analyses w/H
Reply #7 - Mar 2nd, 2007 at 2:48am
 
Dear Sergei. I would be very happy to receive a draft of the chapter on positive selection using HyPhy,  that you wrote.
I hope it's not too late to send comments.
Thanks and best regards
Laura
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Re: [ANNOUNCEMENT]How to do selection analyses w/H
Reply #8 - Mar 15th, 2007 at 7:22am
 
Dear Sergei,
I would be really grateful if you could send me the chapter you have written. I will review it and then I will provide you with sincere feedback.
Thank you very much in advance.
Nicolás Palopoli.
Unidad de Fisicoquímica -
Universidad Nacional de Quilmes, Argentina
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wuguanghua
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Re: [ANNOUNCEMENT]How to do selection analyses w/H
Reply #9 - Jun 14th, 2007 at 5:53pm
 
Thanks for your powful and free tool the Hyphy which would much facilitate my study. And I would appreciate it a lot if you can send me materials of how to do selection analysis with Hyphy!my email is wugh@genomics.org.cn
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Re: [ANNOUNCEMENT]How to do selection analyses w/H
Reply #10 - Sep 28th, 2007 at 1:19pm
 
Dear Sergei:

I am very interested in receiving the draft version of how to do selection analyses with Hyphy. I am currently working on selection analyses using Hyphy and have some questions. I believe it will help a lot. 

Thank you very much.

Joice
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Sergei
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Re: [ANNOUNCEMENT]How to do selection analyses w/H
Reply #11 - Sep 28th, 2007 at 1:48pm
 
Dear Joice,

The book chapter can be downloaded from Multimedia File Viewing and Clickable Links are available for Registered Members only!!  You need to Login Login

Cheers,
Sergei
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Associate Professor
Division of Infectious Diseases
Division of Biomedical Informatics
School of Medicine
University of California San Diego
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wuguanghua
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Re: [ANNOUNCEMENT]How to do selection analyses w/H
Reply #12 - Sep 28th, 2007 at 6:14pm
 
Hi,
Thank you so much for keeping providing many useful tools and ideas about genomic adaptive selection analysis. They are really helpful for our study. I would like to have your draft of How to do selection analysis with Hyphy. Could you please email it to me? My email is wugh@genomics.org.cn
Thanks!
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