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PARRIS/GARD within HYPHY?? (Read 2088 times)
sunilkalmadi
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PARRIS/GARD within HYPHY??
Jan 29th, 2008 at 3:48pm
 
dears
i would like  to know whether there is any standard analysis implemented in stand alone hyphy package which is same as datamonkey's PARRIS and GA branch?  i am interested since task on web server was taking too much time

thank you
regards
sunil
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Sergei
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Re: PARRIS/GARD within HYPHY??
Reply #1 - Jan 29th, 2008 at 4:18pm
 
Dear Sunil,

sunilkalmadi wrote on Jan 29th, 2008 at 3:48pm:
dears
i would like  to know whether there is any standard analysis implemented in stand alone hyphy package which is same as datamonkey's PARRIS and GA branch?  i am interested since task on web server was taking too much time


PARRIS is a standard analysis located under the Selection/Recombination rubrik. You can run it from a standalone version.
GA branch is a computer intensive task (it requires an MPI cluster). If you want to give that a try, download the files from Multimedia File Viewing and Clickable Links are available for Registered Members only!!  You need to Login Login and take a look at the README file.

Cheers,
Sergei
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sunilkalmadi
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Re: PARRIS/GARD within HYPHY??
Reply #2 - Jan 30th, 2008 at 5:12am
 
dear Sergei,
thanks for your suggestions..

regards,
sunil
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