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recombination (Read 3564 times)
EHC
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recombination
Apr 14th, 2010 at 9:10am
 
Hi,

I am new here. I would like to run a recombination analysis.
When I choose gard.bf on my OSX I get  "This analysis requires an MPI environment to run". I am not sure if I am missing something on my computer. 

Thank you,
EHC
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Art Poon
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Re: recombination
Reply #1 - Apr 14th, 2010 at 9:23am
 
Hi EHC,

MPI stands for message passing interface and is a communication protocol that allows one processor to talk to others.  GARD uses this to distribute jobs across multiple processors, and is often run in a clustered computing environment.  It -is- possible to compile an MPI-enabled build of HyPhy on a Mac and take advantage of multi-core processors in this fashion, but not trivial.

Cheers,
- Art.
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EHC
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Re: recombination
Reply #2 - Apr 14th, 2010 at 9:41am
 
Thanks. Can someone point me to the instructions ?
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Art Poon
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Re: recombination
Reply #3 - Apr 14th, 2010 at 9:46am
 
Using the search function on the board for keywords "MPI" and "mac" turns up this topic:

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wayne
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Re: recombination
Reply #4 - Apr 15th, 2010 at 6:42pm
 
yeah or just use the GARD analysis option on the webserver Multimedia File Viewing and Clickable Links are available for Registered Members only!!  You need to Login Login

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