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GABranch and GARD (Read 2116 times)
Lillian
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GABranch and GARD
Dec 21st, 2011 at 8:54am
 
Hi,

I found on the DataMonkey website two very useful methods, GABranch for testing selective pressure vary along lineages and GARD for finding all the recombination breakpoints. I just wonder can I run both of these analyses in HyPhy Package instead of using the website server? If yes, how can I do this?

Thanks

Lillian
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Sergei
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Re: GABranch and GARD
Reply #1 - Dec 21st, 2011 at 2:17pm
 
Hi Lillian,

You can run both in HYPHY, but they both require MPI (effectively a computer cluster). See page 5 of Multimedia File Viewing and Clickable Links are available for Registered Members only!!  You need to Login Login


Sergei
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Lillian
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Re: GABranch and GARD
Reply #2 - Dec 21st, 2011 at 6:27pm
 
Hi Sergei,

Thanks so much for your kind help.

Best regards,

Lillian
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