EricE
YaBB Newbies
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Curious HyPhy user
Posts: 2
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When running FUBAR with the test data on the HyPhy 2.1.2 release it fails on stage 4.
FUBAR was run with default parameters and HyPhy was install make MP2 and make install.
The following is the error message encountered.
Processing samples from chain 0/5 0Error: Operation '/' is not implemented/defined for a Matrix
Function call stack 1 : pos_sel_matrices+(thisSample*(site_probs["conditionals"]$positive_selection_stencil)/norm_matrix) Standard input redirect: Empty Associative List------- 2 : tabulateGridResults(points,sites,samples,_chainCount) Standard input redirect: Empty Associative List------- 3 : ExecuteAFile from file Join(DIRECTORY_SEPARATOR,{{PATH_TO_CURRENT_BF[0][Abs(PATH_TO_CURRENT_BF)-2],"FUBAR_HBL","FUBAR_PHASE_4.bf"}}) using basepath /share/apps/FUBAR/. reading input from {"0":_fubarNucFitLocation,"1":_fubarGridInfoLocation,"2":_fubarMCMCSamplesLocati on,"3":""+_fubarChainCount,"4":_fubarResultLocation,"5":_fubarSimFitFile,"6":_fu barSimGrid,"7":_fubarCodonFitLocation} -------
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