Hello:

I have been trying to run a GARD analysis on our linux cluster so that I can use the required mpi environment. I get an error when the program tries to write an output file to the lib/hyphy/TemplateBatchFiles directory. This also happens when I try to run SBP analysis. I have noticed an odd behavior when trying to set up the runs. For GARD I get the prompt

Please select the file you want to use (or press ENTER to return to the list of analysis types):Initialized GARD on 4 MPI nodes.
Population size is 6 models

When I type in the filename and path I get

/usr/local/stow/hyphy/lib/hyphy/TemplateBatchFiles/Nucleotide file to screen::

So I retype the filename and path and things proceed looking like they should (I get prompts for options that make sense). Then when the program tries to run I get the error

/usr/local/stow/hyphy/lib/hyphy/TemplateBatchFiles/Save results to::Error:

Master node received an error:Could not create/open output file at path '/usr/local/stow/hyphy/lib/hyphy/TemplateBatchFiles/1'. in call to fprintf(

Function call stack
1 : fprintf(PROMPT_FOR_FILE,CLEAR_FILE,KEEP_OPEN)

Why does the program try to write output to a directory which doesn't exist in /TemplateBatchFiles? Any ideas how I managed to invoke this behavior?