Navigation Banner
 
HYPHY Bug fixes.
Junk MLEs reported by ModelTest.bf.
09/24/2002
Description: When running ModelTest from Standard Analyses, in some cases, the MLEs displayed for the model were a permutation of the correct MLEs. This doesn't affect the validitiy of model selection, just the reported MLEs at the end of the analysis. This bug affects all platforms.

Fix: Replace the file 'ModelTest.bf' in 'TemplateBatchFiles' within the HyPhy directory with this file.

Custom Nucleotide model malfunctions with NJ tree search - infinite loop.
09/24/2002
Description: When running Neighbor Joining standard analysis on nucleotide data with Custom model selected, the analysis enters an infinite loop. This bug affects all platforms.

Fix: Replace the file 'custm4x4.mdl' in 'TemplateBatchFiles/TemplateModels' within the HyPhy directory with this file.

 
Sergei L. Kosakovsky Pond and Spencer V. Muse, 1997-2002