Welcome, Guest. Please Login
YaBB - Yet another Bulletin Board
 
  HomeHelpSearchLogin  
 
testbranchdnds (Read 2579 times)
Astrid
YaBB Newbies
*
Offline


Curious HyPhy user

Posts: 1
testbranchdnds
Nov 28th, 2012 at 10:56am
 
Hi
I am new to Hyphy and was running an analysis on the GUI. So I choose Standard analysis -> Positive Selection -> testBranchdNdS i feed in my alignment and my (rooted) tree
The analysis runs (well it chrashed a couple of times)... I choose to test all nodes (to start I left all parameters on default) After 2h it finishes and I can go to results and do the test and I do get 4 Trees at the end but not a dN/dS tree.....
How can I get this one? The option dN-dS branches is always grey.... Thanks in advance
Back to top
 
 
IP Logged
 
Sergei
YaBB Administrator
*****
Offline


Datamonkeys are forever...

Posts: 1658
UCSD
Gender: male
Re: testbranchdnds
Reply #1 - Nov 29th, 2012 at 6:55am
 
Hi Astrid,

Please use BranchSiteREL instead (testbranchdnds is an old an unsupported analysis; sorry about your issues with it).
Multimedia File Viewing and Clickable Links are available for Registered Members only!!  You need to Login Login

Sergei
Back to top
 

Associate Professor
Division of Infectious Diseases
Division of Biomedical Informatics
School of Medicine
University of California San Diego
WWW WWW  
IP Logged