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substitution rate differences on lineges (Read 1050 times)
Ed
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Curious HyPhy user

Posts: 7
substitution rate differences on lineges
Oct 11th, 2012 at 12:55pm
 
Hello community,

I have a phylogeny of viruses that infect several hosts, and I'd like to test whether hosts switches are associated with changes in rates. I figured I'd like to use GAbranch but I can't seem to find it on HyPhy. I tried datamonkey but given the size of my alignment it's not feasible.
Is there any .bf file that I can use? Is Gabranch available in HyPhy?

Thanks,

Ed
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