Sequence Analysis Have questions, comments or ideas you wish to sound out about theoretical issues in sequence analysis and inference? Post them here! (Moderators: Sergei, Simon)

Topics: 45 Posts: 159

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		Subject	Started By	Replies	Views	Last Post
		Branch-site REL and mean omega values	jstrohmg	1	3997	Jun 18th, 2014 at 10:56am By: Sergei
		SBP identifies recombination but GARD doesn't	shris	2	4761	Jun 17th, 2014 at 1:35pm By: shris
		GARD, indels and missing data	DarrenJObbard	0	2633	May 22nd, 2014 at 8:01am By: DarrenJObbard
		What method(s) to use for positive selection (intraspecific var)	Hernan	3	4170	May 7th, 2014 at 5:45pm By: Hernan
		detection of selection	Kshipra	0	1915	Feb 21st, 2014 at 6:49am By: Kshipra
		dN/dS point estimates: FUBAR vs REL/M8	konrad	1	4163	Feb 14th, 2014 at 10:41am By: Ryan Schott
		different rate matrix for every codon	YuanlingRui	3	3589	Oct 26th, 2013 at 7:44pm By: YuanlingRui
		Covariation on same or different branches?	Catherine Macken	3	3535	Feb 11th, 2013 at 10:16am By: Sergei
		Positive selection in paralogous gene families	Ana Guimaraes	2	3178	Dec 6th, 2012 at 10:04am By: Ana Guimaraes
		Checking for dS saturation	Hiacynt	1	3231	Dec 4th, 2012 at 1:59am By: konrad
		phylogenies and selection detection	Ed	1	2662	Nov 9th, 2012 at 1:39pm By: Sergei
		Assumptions of SLAC and REL	Maurice	1	2779	Oct 26th, 2012 at 8:49am By: Sergei
		Odd GARD output	CrystalH	1	2459	Dec 12th, 2011 at 3:20pm By: Art Poon
		Compare selection script	beyondblueskies	0	1699	Jun 25th, 2011 at 12:00pm By: beyondblueskies
		Evolutionary Fingerprint	beyondblueskies	4	4664	Jun 24th, 2011 at 3:56pm By: beyondblueskies
		GARD: whole vs partial dataset	CrystalH	1	2525	Jun 15th, 2011 at 9:01pm By: Sergei
		AIC-c as a measure of recombination rate?	michiel	2	3215	May 23rd, 2011 at 12:40pm By: michiel
		GABranch-Test Error	Kartik Sunagar	0	1778	May 21st, 2011 at 2:14pm By: Kartik Sunagar
		ASR	Kartik Sunagar	4	4407	May 13th, 2011 at 2:14pm By: Kartik Sunagar
		Dated Tips Molecular Clock Interpretation	aculasso	2	3936	Apr 29th, 2011 at 10:15am By: aculasso

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